Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS06405 | Not Available | Negative | 1391285 - 1391785 | 18330.1 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS06410 | Not Available | Negative | 1391782 - 1393041 | 46351.9 |
| mmpl family transporter | CE139_RS06415 | Not Available | Negative | 1393034 - 1395358 | 82242.5 |
| outer membrane lipoprotein carrier protein lola | CE139_RS06420 | Not Available | Negative | 1395355 - 1395939 | 21048.5 |
| acyl-coa thioesterase | CE139_RS06425 | Not Available | Negative | 1395927 - 1396361 | 16801.4 |
| histidine ammonia-lyase | CE139_RS06430 | Not Available | Negative | 1396354 - 1397880 | 54587.8 |
| glycosyl transferase | CE139_RS06435 | Not Available | Negative | 1397870 - 1398790 | 35084.4 |
| glycosyltransferase family 2 protein | CE139_RS06440 | Not Available | Negative | 1398787 - 1399524 | 27643.8 |
| amp-binding protein | CE139_RS06445 | Not Available | Negative | 1399521 - 1401167 | 59357.8 |
| hypothetical protein | CE139_RS06450 | Not Available | Negative | 1401164 - 1401736 | 21008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





