Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1383781 - 1383857 | Not Available |
| nadp-dependent succinate-semialdehyde dehydrogenase | CE139_RS06360 | Not Available | Positive | 1384200 - 1385581 | 48984.8 |
| duf2857 domain-containing protein | CE139_RS06365 | Not Available | Positive | 1385682 - 1386026 | 12977.2 |
| hypothetical protein | CE139_RS06370 | Not Available | Negative | 1386423 - 1386659 | 8459.96 |
| excinuclease | CE139_RS06375 | Not Available | Negative | 1386719 - 1387168 | 15866.2 |
| hypothetical protein | CE139_RS06380 | Not Available | Negative | 1387270 - 1387668 | 15014.9 |
| beta-ketoacyl-acp synthase | CE139_RS06385 | Not Available | Negative | 1387692 - 1388924 | 44067.5 |
| 3-oxoacyl-acp reductase fabg | CE139_RS06390 | Not Available | Negative | 1388924 - 1389661 | 25810.4 |
| 3-hydroxylacyl-acp dehydratase | CE139_RS06395 | Not Available | Negative | 1389658 - 1390107 | 15884.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CE139_RS06400 | Not Available | Negative | 1390104 - 1391288 | 40703.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





