Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4357 domain-containing protein | CE139_RS06305 | Not Available | Positive | 1366497 - 1368647 | 80481.9 |
| type i restriction endonuclease subunit r | CE139_RS06310 | Not Available | Positive | 1368671 - 1371853 | 120006.0 |
| helix-turn-helix domain-containing protein | CE139_RS06315 | Not Available | Negative | 1372067 - 1372327 | 9852.98 |
| hypothetical protein | CE139_RS06320 | Not Available | Positive | 1372427 - 1372966 | 20761.7 |
| hypothetical protein | CE139_RS06325 | Not Available | Positive | 1373004 - 1373249 | 8804.52 |
| hypothetical protein | CE139_RS06330 | Not Available | Positive | 1373239 - 1373547 | 11652.9 |
| hypothetical protein | CE139_RS06335 | Not Available | Positive | 1374296 - 1374880 | 22373.1 |
| hypothetical protein | CE139_RS06340 | Not Available | Negative | 1374918 - 1375709 | 29825.3 |
| duf4011 domain-containing anti-phage protein hhe | CE139_RS06345 | Not Available | Positive | 1376616 - 1382345 | 215089.0 |
| site-specific integrase | CE139_RS06350 | Not Available | Negative | 1382593 - 1383675 | 41702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





