Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease subunit pstc | CE139_RS06210 | Not Available | Positive | 1347733 - 1348707 | 34989.5 |
| phosphate abc transporter permease psta | CE139_RS06215 | Not Available | Positive | 1348707 - 1349582 | 31176.9 |
| phosphate abc transporter atp-binding protein pstb | CE139_RS06220 | Not Available | Positive | 1349588 - 1350352 | 28446.5 |
| putative porin | CE139_RS06225 | Not Available | Positive | 1350644 - 1351930 | 47038.8 |
| duf2845 domain-containing protein | CE139_RS06230 | Not Available | Negative | 1352705 - 1352995 | 10475.6 |
| dna-3-methyladenine glycosylase | CE139_RS06235 | Not Available | Negative | 1353037 - 1353618 | 20728.8 |
| hypothetical protein | CE139_RS06240 | Not Available | Negative | 1353615 - 1353794 | 6279.47 |
| sdr family oxidoreductase | CE139_RS06245 | Not Available | Negative | 1353800 - 1354693 | 31536.4 |
| hypothetical protein | CE139_RS06250 | Not Available | Negative | 1354984 - 1355238 | 9417.38 |
| methyl-accepting chemotaxis protein | CE139_RS25650 | Not Available | Negative | 1355404 - 1356267 | 30430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





