Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | CE139_RS06110 | Not Available | Positive | 1326355 - 1327185 | 29427.2 |
| alkaline phosphatase family protein | CE139_RS06115 | Not Available | Negative | 1327193 - 1329010 | 62853.5 |
| aldolase | CE139_RS06120 | Not Available | Positive | 1329143 - 1329925 | 28047.5 |
| hypothetical protein | CE139_RS06125 | Not Available | Negative | 1329935 - 1330216 | 10227.4 |
| duf2857 domain-containing protein | CE139_RS06130 | Not Available | Negative | 1330586 - 1332673 | 76521.3 |
| mfs transporter | CE139_RS06135 | Not Available | Positive | 1332979 - 1334340 | 49550.2 |
| 2-isopropylmalate synthase | CE139_RS06140 | Not Available | Positive | 1334492 - 1335562 | 38867.3 |
| arac family transcriptional regulator | CE139_RS06145 | Not Available | Negative | 1335543 - 1336331 | 28545.5 |
| marr family winged helix-turn-helix transcriptional regulator | CE139_RS06150 | Not Available | Negative | 1336337 - 1336828 | 18383.9 |
| mfs transporter | CE139_RS06155 | Not Available | Positive | 1336907 - 1338121 | 41508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





