Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | CE139_RS06060 | Not Available | Negative | 1316534 - 1317652 | 38842.4 |
| alpha/beta fold hydrolase | CE139_RS06065 | Not Available | Negative | 1317776 - 1318648 | 32384.6 |
| tetr/acrr family transcriptional regulator | CE139_RS06070 | Not Available | Positive | 1318722 - 1319285 | 20317.5 |
| hypothetical protein | CE139_RS06075 | Not Available | Positive | 1319346 - 1319483 | 5108.4 |
| sdr family oxidoreductase | CE139_RS06080 | Not Available | Negative | 1319998 - 1320774 | 27004.3 |
| amidohydrolase family protein | CE139_RS06085 | Not Available | Negative | 1320771 - 1321631 | 31631.5 |
| l-fuconate dehydratase | CE139_RS06090 | Not Available | Negative | 1321628 - 1322920 | 47837.4 |
| fumarylacetoacetate hydrolase family protein | CE139_RS06095 | Not Available | Negative | 1323027 - 1323875 | 30520.3 |
| sdr family oxidoreductase | CE139_RS06100 | Not Available | Negative | 1323919 - 1324659 | 25304.2 |
| fadr/gntr family transcriptional regulator | CE139_RS06105 | Not Available | Positive | 1324811 - 1325575 | 27772.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





