Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS06010 | Not Available | Positive | 1306798 - 1307049 | 9090.91 |
| glucose 1-dehydrogenase | CE139_RS06015 | Not Available | Negative | 1307241 - 1308071 | 28791.4 |
| hypothetical protein | CE139_RS06020 | Not Available | Negative | 1308141 - 1308620 | 16291.0 |
| hypothetical protein | CE139_RS06025 | Not Available | Negative | 1308745 - 1309866 | 39797.2 |
| dead/deah box helicase | CE139_RS06030 | Not Available | Negative | 1310072 - 1312993 | 109384.0 |
| hypothetical protein | CE139_RS06035 | Not Available | Negative | 1313058 - 1313795 | 27264.1 |
| helix-turn-helix domain-containing protein | CE139_RS06040 | Not Available | Negative | 1313933 - 1314220 | 10712.9 |
| type ii toxin-antitoxin system rele/pare family toxin | CE139_RS06045 | Not Available | Negative | 1314226 - 1314540 | 11933.3 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | CE139_RS06050 | Not Available | Negative | 1314746 - 1316182 | 49663.5 |
| nad(p) transhydrogenase subunit alpha | CE139_RS06055 | Not Available | Negative | 1316184 - 1316498 | 11084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





