Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | CE139_RS00240 | Not Available | Positive | 52007 - 52513 | 17939.6 |
| duf2857 domain-containing protein | CE139_RS00245 | Not Available | Positive | 52631 - 54496 | 69047.2 |
| transketolase | CE139_RS00250 | Not Available | Negative | 54566 - 56563 | 72160.1 |
| membrane integrity-associated transporter subunit pqic | CE139_RS00255 | Not Available | Negative | 56647 - 57246 | 21024.3 |
| intermembrane transport protein pqib | CE139_RS00260 | Not Available | Negative | 57243 - 58889 | 59333.8 |
| paraquat-inducible protein a | CE139_RS00265 | Not Available | Negative | 58873 - 59514 | 23252.8 |
| paraquat-inducible protein a | CE139_RS00270 | Not Available | Negative | 59511 - 60152 | 22733.9 |
| arsr/smtb family transcription factor | CE139_RS00275 | Not Available | Positive | 60366 - 61364 | 35468.7 |
| methionine adenosyltransferase | CE139_RS00280 | Not Available | Positive | 61481 - 62671 | 42665.7 |
| phosphatase pap2 family protein | CE139_RS00285 | Not Available | Positive | 62842 - 63471 | 22193.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





