Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS05965 | Not Available | Negative | 1294728 - 1295249 | 19320.1 |
| dihydrolipoyl dehydrogenase | CE139_RS05970 | Not Available | Positive | 1295484 - 1296920 | 49955.4 |
| methyl-accepting chemotaxis protein | CE139_RS25640 | Not Available | Negative | 1298277 - 1299044 | 27274.6 |
| duf2857 domain-containing protein | CE139_RS25645 | Not Available | Negative | 1299132 - 1300220 | 39270.2 |
| sugar porter family mfs transporter | CE139_RS05980 | Not Available | Negative | 1300374 - 1301786 | 50485.0 |
| lysr family transcriptional regulator | CE139_RS05985 | Not Available | Negative | 1301971 - 1302864 | 31534.1 |
| mfs transporter | CE139_RS05990 | Not Available | Positive | 1302961 - 1304130 | 39304.5 |
| carboxymuconolactone decarboxylase family protein | CE139_RS05995 | Not Available | Negative | 1304144 - 1304704 | 20453.3 |
| gnat family n-acetyltransferase | CE139_RS06000 | Not Available | Positive | 1304885 - 1305385 | 19183.6 |
| alpha/beta fold hydrolase | CE139_RS06005 | Not Available | Negative | 1305395 - 1306492 | 39372.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





