Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | CE139_RS05865 | Not Available | Positive | 1270454 - 1271017 | 20978.0 |
| branched-chain amino acid aminotransferase | CE139_RS05870 | Not Available | Negative | 1272006 - 1273025 | 36836.9 |
| hypothetical protein | CE139_RS05875 | Not Available | Positive | 1273413 - 1273904 | 18278.9 |
| zinc-dependent alcohol dehydrogenase family protein | CE139_RS05880 | Not Available | Negative | 1273901 - 1274944 | 36634.2 |
| 3'-5' exonuclease | CE139_RS05885 | Not Available | Negative | 1275039 - 1275731 | 25553.7 |
| dna polymerase ii | CE139_RS05890 | Not Available | Positive | 1275919 - 1278273 | 88069.5 |
| nucleotidyltransferase domain-containing protein | CE139_RS05895 | Not Available | Positive | 1278273 - 1279055 | 29549.5 |
| yghx family hydrolase | CE139_RS05900 | Not Available | Positive | 1279327 - 1280217 | 32152.0 |
| 2-methylaconitate cis-trans isomerase prpf | CE139_RS05905 | Not Available | Positive | 1280239 - 1281390 | 39760.9 |
| pas domain s-box protein | CE139_RS25245 | Not Available | Negative | 1282143 - 1285484 | 123659.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





