Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bmp family abc transporter substrate-binding protein | CE139_RS05815 | Not Available | Positive | 1257961 - 1259052 | 39321.9 |
| abc transporter atp-binding protein | CE139_RS05820 | Not Available | Positive | 1259129 - 1260643 | 53611.7 |
| abc transporter permease | CE139_RS05825 | Not Available | Positive | 1260636 - 1261763 | 40269.4 |
| abc transporter permease | CE139_RS05830 | Not Available | Positive | 1261760 - 1262686 | 32509.8 |
| cysteine hydrolase family protein | CE139_RS05835 | Not Available | Positive | 1262683 - 1263375 | 25286.2 |
| arnt family glycosyltransferase | CE139_RS05840 | Not Available | Negative | 1263476 - 1265101 | 59200.6 |
| histidinol-phosphatase | CE139_RS05845 | Not Available | Negative | 1266130 - 1266936 | 28690.1 |
| adenosine deaminase | CE139_RS05850 | Not Available | Negative | 1266939 - 1267889 | 35551.3 |
| acyltransferase family protein | CE139_RS05855 | Not Available | Positive | 1268117 - 1269217 | 40371.9 |
| calcium:proton antiporter | CE139_RS05860 | Not Available | Positive | 1269338 - 1270444 | 38655.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





