Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS25635 | Not Available | Negative | 1248772 - 1250043 | 45766.1 |
| m48 family metallopeptidase | CE139_RS05770 | Not Available | Positive | 1250205 - 1251026 | 29258.1 |
| methyltransferase | CE139_RS05775 | Not Available | Negative | 1251145 - 1252146 | 35267.3 |
| 2-hydroxyacid dehydrogenase | CE139_RS05780 | Not Available | Negative | 1252176 - 1253135 | 33483.6 |
| acp phosphodiesterase | CE139_RS05785 | Not Available | Positive | 1253230 - 1253817 | 21857.2 |
| lysophospholipid acyltransferase family protein | CE139_RS05790 | Not Available | Negative | 1253760 - 1254557 | 28785.5 |
| gnat family n-acetyltransferase | CE139_RS05795 | Not Available | Negative | 1254554 - 1255282 | 26324.0 |
| peptidylprolyl isomerase | CE139_RS05800 | Not Available | Positive | 1255508 - 1255993 | 16902.7 |
| isopenicillin n synthase family dioxygenase | CE139_RS05805 | Not Available | Positive | 1256535 - 1257554 | 37276.2 |
| voc family protein | CE139_RS05810 | Not Available | Positive | 1257554 - 1257940 | 14338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





