Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | CE139_RS05720 | Not Available | Positive | 1237773 - 1238351 | 20922.6 |
| efflux rnd transporter periplasmic adaptor subunit | CE139_RS05725 | Not Available | Positive | 1238699 - 1239892 | 42595.0 |
| efflux rnd transporter permease subunit | CE139_RS05730 | Not Available | Positive | 1239905 - 1243042 | 112990.0 |
| efflux transporter outer membrane subunit | CE139_RS05735 | Not Available | Positive | 1243044 - 1244546 | 54686.3 |
| yajg family lipoprotein | CE139_RS05740 | Not Available | Positive | 1244665 - 1245252 | 20608.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CE139_RS05745 | Not Available | Negative | 1245313 - 1246473 | 43147.4 |
| cpxcg motif-containing cysteine-rich protein | CE139_RS05750 | Not Available | Positive | 1246581 - 1246763 | 6964.85 |
| putative signal transducing protein | CE139_RS05755 | Not Available | Positive | 1246763 - 1247023 | 8860.67 |
| sos response-associated peptidase | CE139_RS05760 | Not Available | Positive | 1247209 - 1247826 | 23347.0 |
| methyl-accepting chemotaxis protein | CE139_RS25630 | Not Available | Negative | 1247914 - 1248798 | 30990.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





