Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS05670 | Not Available | Positive | 1220809 - 1222839 | 71930.1 |
| cher family methyltransferase | CE139_RS05675 | Not Available | Positive | 1222901 - 1223749 | 32057.8 |
| hpt domain-containing protein | CE139_RS05680 | Not Available | Positive | 1223761 - 1230900 | 257348.0 |
| chemotaxis protein cheb | CE139_RS05685 | Not Available | Positive | 1230893 - 1231912 | 36439.7 |
| chemotaxis protein chew | CE139_RS05690 | Not Available | Positive | 1231924 - 1232391 | 16551.3 |
| had-ia family hydrolase | CE139_RS05695 | Not Available | Negative | 1232388 - 1233047 | 22708.3 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CE139_RS05700 | Not Available | Negative | 1233116 - 1233844 | 26192.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CE139_RS05705 | Not Available | Negative | 1233858 - 1235258 | 52309.5 |
| flavin monoamine oxidase family protein | CE139_RS05710 | Not Available | Positive | 1235432 - 1237009 | 56341.3 |
| cytochrome b | CE139_RS05715 | Not Available | Positive | 1237183 - 1237737 | 20431.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





