Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dynamin family protein | CE139_RS05570 | Not Available | Negative | 1202484 - 1204442 | 73117.6 |
| yggt family protein | CE139_RS05575 | Not Available | Negative | 1204561 - 1205154 | 21346.4 |
| pyrroline-5-carboxylate reductase | CE139_RS05580 | Not Available | Negative | 1205164 - 1205982 | 28590.5 |
| yggs family pyridoxal phosphate-dependent enzyme | CE139_RS05585 | Not Available | Negative | 1205992 - 1206687 | 24482.2 |
| type iv pilus twitching motility protein pilt | CE139_RS05590 | Not Available | Positive | 1206814 - 1207848 | 37944.0 |
| pilt/pilu family type 4a pilus atpase | CE139_RS05595 | Not Available | Positive | 1207848 - 1208990 | 42350.3 |
| udgx family uracil-dna binding protein | CE139_RS05600 | Not Available | Negative | 1208987 - 1210429 | 53517.7 |
| putative dna modification/repair radical sam protein | CE139_RS05605 | Not Available | Negative | 1210430 - 1211641 | 45058.4 |
| c40 family peptidase | CE139_RS05610 | Not Available | Negative | 1211774 - 1212331 | 20205.0 |
| nine protein | CE139_RS05615 | Not Available | Positive | 1212766 - 1213170 | 15709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





