Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | CE139_RS05470 | Not Available | Negative | 1184009 - 1184494 | 17760.5 |
| hydrolase | CE139_RS05475 | Not Available | Negative | 1184594 - 1185598 | 37621.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CE139_RS05480 | Not Available | Negative | 1185595 - 1186164 | 20671.6 |
| m16 family metallopeptidase | CE139_RS05485 | Not Available | Negative | 1186166 - 1187605 | 50989.3 |
| m16 family metallopeptidase | CE139_RS05490 | Not Available | Negative | 1187602 - 1188963 | 50288.9 |
| signal recognition particle-docking protein ftsy | CE139_RS05495 | Not Available | Positive | 1189166 - 1190626 | 51283.0 |
| cell division atp-binding protein ftse | CE139_RS05500 | Not Available | Positive | 1190623 - 1191297 | 24828.2 |
| permease-like cell division protein ftsx | CE139_RS05505 | Not Available | Positive | 1191294 - 1192304 | 36861.4 |
| rna polymerase sigma factor rpoh | CE139_RS05510 | Not Available | Positive | 1192466 - 1193320 | 32504.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CE139_RS05515 | Not Available | Negative | 1193522 - 1194223 | 26678.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





