Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoic acid system family protein | CE139_RS05320 | Not Available | Positive | 1146675 - 1146953 | 10183.3 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | CE139_RS05325 | Not Available | Negative | 1146960 - 1147331 | 13712.3 |
| atp-dependent protease atpase subunit hslu | CE139_RS05330 | Not Available | Negative | 1147535 - 1148884 | 50223.6 |
| atp-dependent protease subunit hslv | CE139_RS05335 | Not Available | Negative | 1148904 - 1149437 | 18936.8 |
| spor domain-containing protein | CE139_RS05340 | Not Available | Negative | 1149683 - 1150420 | 26041.2 |
| arginine--trna ligase | CE139_RS05345 | Not Available | Negative | 1150439 - 1152196 | 64490.7 |
| primosomal protein n' | CE139_RS05350 | Not Available | Negative | 1152293 - 1154506 | 82527.1 |
| 50s ribosomal protein l31 | CE139_RS05355 | Not Available | Positive | 1154664 - 1154879 | 7933.49 |
| thermonuclease family protein | CE139_RS05360 | Not Available | Positive | 1154879 - 1155706 | 30165.1 |
| malic enzyme-like nad(p)-binding protein | CE139_RS05365 | Not Available | Positive | 1155819 - 1157087 | 45176.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





