Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis glucosyltransferase mdoh | CE139_RS05270 | Not Available | Positive | 1137690 - 1140287 | 97427.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CE139_RS05275 | Not Available | Negative | 1140358 - 1141068 | 25899.0 |
| twin-arginine translocase subunit tatc | CE139_RS05280 | Not Available | Negative | 1141065 - 1141862 | 29919.4 |
| sec-independent protein translocase protein tatb | CE139_RS05285 | Not Available | Negative | 1141859 - 1142215 | 13069.8 |
| twin-arginine translocase tata/tate family subunit | CE139_RS05290 | Not Available | Negative | 1142225 - 1142491 | 9975.96 |
| phosphoribosyl-atp diphosphatase | CE139_RS05295 | Not Available | Negative | 1142519 - 1142851 | 12186.4 |
| phosphoribosyl-amp cyclohydrolase | CE139_RS05300 | Not Available | Negative | 1142844 - 1143245 | 14946.6 |
| ubiquinone biosynthesis regulatory protein kinase ubib | CE139_RS05305 | Not Available | Negative | 1143523 - 1145121 | 61434.1 |
| scp2 domain-containing protein | CE139_RS05310 | Not Available | Negative | 1145118 - 1145753 | 23220.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CE139_RS05315 | Not Available | Negative | 1145753 - 1146523 | 28327.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





