Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | CE139_RS05170 | Not Available | Negative | 1117908 - 1118225 | 11699.1 |
| trna dihydrouridine synthase dusb | CE139_RS05175 | Not Available | Negative | 1118222 - 1119214 | 35558.0 |
| duf3426 domain-containing protein | CE139_RS05180 | Not Available | Negative | 1119370 - 1120797 | 51387.3 |
| 50s ribosomal protein l11 methyltransferase | CE139_RS05185 | Not Available | Negative | 1120907 - 1121782 | 31748.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | CE139_RS05190 | Not Available | Negative | 1122022 - 1123368 | 48791.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | CE139_RS05195 | Not Available | Negative | 1123385 - 1123846 | 16219.5 |
| type ii 3-dehydroquinate dehydratase | CE139_RS05200 | Not Available | Negative | 1123900 - 1124346 | 15892.1 |
| protein-disulfide reductase dsbd | CE139_RS05205 | Not Available | Negative | 1124464 - 1126227 | 61970.3 |
| pled family two-component system response regulator | CE139_RS05210 | Not Available | Negative | 1126284 - 1127897 | 60183.2 |
| duf2333 family protein | CE139_RS05215 | Not Available | Positive | 1128165 - 1129181 | 37995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





