Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | CE139_RS05070 | Not Available | Positive | 1095176 - 1095967 | 27918.0 |
| acyloxyacyl hydrolase | CE139_RS05075 | Not Available | Positive | 1096119 - 1096643 | 18692.7 |
| cryptochrome/photolyase family protein | CE139_RS05080 | Not Available | Negative | 1096676 - 1098097 | 52970.9 |
| merr family transcriptional regulator | CE139_RS05085 | Not Available | Negative | 1098094 - 1099038 | 35330.4 |
| ybga family protein | CE139_RS05090 | Not Available | Negative | 1099028 - 1099999 | 36112.5 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS05095 | Not Available | Negative | 1100125 - 1101222 | 39918.6 |
| tigr01777 family oxidoreductase | CE139_RS05100 | Not Available | Positive | 1101288 - 1102196 | 32870.9 |
| ferrochelatase | CE139_RS05105 | Not Available | Positive | 1102193 - 1103248 | 39754.1 |
| uracil-xanthine permease family protein | CE139_RS05110 | Not Available | Negative | 1103268 - 1104533 | 43626.2 |
| uracil phosphoribosyltransferase | CE139_RS05115 | Not Available | Negative | 1104536 - 1105174 | 22946.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





