Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | CE139_RS05020 | Not Available | Negative | 1085979 - 1086602 | 22062.5 |
| ribose-phosphate pyrophosphokinase | CE139_RS05025 | Not Available | Negative | 1086725 - 1087666 | 34201.4 |
| Trna-gln | Not Available | Not Available | Positive | 1087708 - 1087782 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CE139_RS05035 | Not Available | Negative | 1087808 - 1088668 | 30404.6 |
| lipoprotein insertase outer membrane protein lolb | CE139_RS05040 | Not Available | Negative | 1088665 - 1089285 | 22931.4 |
| tetratricopeptide repeat protein | CE139_RS05045 | Not Available | Negative | 1089282 - 1091006 | 64018.9 |
| glutamyl-trna reductase | CE139_RS05050 | Not Available | Positive | 1091253 - 1092521 | 46253.5 |
| peptide chain release factor 1 | CE139_RS05055 | Not Available | Positive | 1092518 - 1093600 | 40398.2 |
| peptide chain release factor n(5)-glutamine methyltransferase | CE139_RS05060 | Not Available | Positive | 1093604 - 1094434 | 30388.1 |
| molybdopterin-synthase adenylyltransferase moeb | CE139_RS05065 | Not Available | Positive | 1094428 - 1095183 | 26451.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





