Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | CE139_RS00140 | Not Available | Positive | 31327 - 31941 | 23443.3 |
| hd-gyp domain-containing protein | CE139_RS00145 | Not Available | Negative | 31949 - 33205 | 46035.5 |
| acyltransferase | CE139_RS00150 | Not Available | Positive | 33311 - 34198 | 33728.4 |
| multidrug transporter subunit mdtd | CE139_RS00155 | Not Available | Positive | 34270 - 35703 | 51037.3 |
| cold-shock protein | CE139_RS00160 | Not Available | Negative | 35791 - 36000 | 7680.11 |
| had-ia family hydrolase | CE139_RS00165 | Not Available | Positive | 36411 - 37103 | 23903.0 |
| nad(p)-dependent oxidoreductase | CE139_RS00170 | Not Available | Negative | 37147 - 38361 | 43581.3 |
| lipid ii flippase murj | CE139_RS00175 | Not Available | Negative | 38649 - 40142 | 54388.1 |
| yebg family protein | CE139_RS00180 | Not Available | Positive | 40459 - 40713 | 9495.34 |
| nucleoside hydrolase | CE139_RS00185 | Not Available | Positive | 40770 - 41723 | 33565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





