Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | CE139_RS04920 | Not Available | Negative | 1066363 - 1067085 | 26349.8 |
| mfs transporter | CE139_RS04925 | Not Available | Negative | 1067245 - 1068471 | 41474.9 |
| lysr family transcriptional regulator | CE139_RS04930 | Not Available | Positive | 1068569 - 1069489 | 33972.2 |
| doxx family protein | CE139_RS04935 | Not Available | Negative | 1069526 - 1069933 | 14053.5 |
| doxx family protein | CE139_RS04940 | Not Available | Positive | 1070231 - 1070656 | 15230.2 |
| antibiotic biosynthesis monooxygenase | CE139_RS04945 | Not Available | Positive | 1070653 - 1071282 | 22917.9 |
| alpha/beta fold hydrolase | CE139_RS04950 | Not Available | Positive | 1071279 - 1072097 | 29662.2 |
| amidohydrolase | CE139_RS04955 | Not Available | Positive | 1072150 - 1073991 | 67985.6 |
| mfs transporter | CE139_RS04960 | Not Available | Positive | 1074019 - 1075599 | 55883.4 |
| isochorismate family cysteine hydrolase ycac | CE139_RS04965 | Not Available | Positive | 1075648 - 1076271 | 22571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





