Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uv dna damage repair endonuclease uvse | CE139_RS04875 | Not Available | Positive | 1055106 - 1056182 | 41515.6 |
| aldo/keto reductase | CE139_RS04880 | Not Available | Positive | 1056479 - 1057396 | 33004.7 |
| ntp/ndp exchange transporter | CE139_RS04885 | Not Available | Positive | 1057397 - 1058689 | 46350.4 |
| metallophosphoesterase | CE139_RS04890 | Not Available | Positive | 1058788 - 1059906 | 40835.2 |
| lysr family transcriptional regulator | CE139_RS04895 | Not Available | Negative | 1059887 - 1060810 | 34162.4 |
| mfs transporter | CE139_RS04900 | Not Available | Positive | 1060952 - 1062454 | 52558.4 |
| glxa family transcriptional regulator | CE139_RS04905 | Not Available | Positive | 1062686 - 1063639 | 34886.1 |
| duf2857 domain-containing protein | CE139_RS04910 | Not Available | Positive | 1063822 - 1064823 | 36710.4 |
| helix-turn-helix domain-containing protein | CE139_RS25240 | Not Available | Negative | 1065136 - 1065576 | 16333.9 |
| deda family protein | CE139_RS04915 | Not Available | Negative | 1065692 - 1066282 | 20622.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





