Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | CE139_RS04775 | Not Available | Positive | 1032093 - 1032923 | 29753.0 |
| ribosomal protein s18-alanine n-acetyltransferase | CE139_RS04780 | Not Available | Positive | 1032920 - 1033372 | 17141.5 |
| hypothetical protein | CE139_RS04785 | Not Available | Negative | 1033386 - 1033919 | 19634.6 |
| trehalose-phosphatase | CE139_RS04790 | Not Available | Positive | 1034047 - 1034805 | 27245.6 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | CE139_RS04795 | Not Available | Positive | 1034807 - 1036258 | 55268.0 |
| Trna-met | Not Available | Not Available | Positive | 1036944 - 1037020 | Not Available |
| murr/rpir family transcriptional regulator | CE139_RS04805 | Not Available | Negative | 1037130 - 1038044 | 33691.2 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | CE139_RS04810 | Not Available | Positive | 1038275 - 1040212 | 70930.8 |
| myo-inosose-2 dehydratase | CE139_RS04815 | Not Available | Positive | 1040238 - 1041137 | 32646.9 |
| 5-deoxy-glucuronate isomerase | CE139_RS04820 | Not Available | Positive | 1041149 - 1041964 | 29797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





