Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CE139_RS04680 | Not Available | Negative | 1010831 - 1011565 | 26686.6 |
| abc transporter permease | CE139_RS04685 | Not Available | Negative | 1011569 - 1012291 | 25683.9 |
| transporter substrate-binding domain-containing protein | CE139_RS04690 | Not Available | Negative | 1012352 - 1013200 | 30160.4 |
| hutd family protein | CE139_RS04695 | Not Available | Negative | 1013484 - 1014023 | 19401.4 |
| histidine utilization repressor | CE139_RS04700 | Not Available | Negative | 1014062 - 1014802 | 27725.0 |
| formimidoylglutamate deiminase | CE139_RS04705 | Not Available | Positive | 1014898 - 1016256 | 49366.6 |
| n-formylglutamate deformylase | CE139_RS04710 | Not Available | Negative | 1016294 - 1017097 | 30055.6 |
| imidazolonepropionase | CE139_RS04715 | Not Available | Negative | 1017090 - 1018295 | 42560.1 |
| purine-cytosine permease family protein | CE139_RS04720 | Not Available | Negative | 1018292 - 1019698 | 50228.2 |
| urocanate hydratase | CE139_RS04725 | Not Available | Negative | 1019810 - 1021492 | 60884.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





