Alloyangia pacifica strain YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Alloyangia pacifica strain YSBP01 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. The presence of five replicons indicates a complex genomic structure, which may contribute to its adaptability and metabolic versatility. The strain is cataloged under several accessions, specifically NZ_CP022189.1, NZ_CP022190.1, NZ_CP022193.1, NZ_CP022194.1, and NZ_CP022192.1, highlighting its genetic information and providing avenues for further research into its genomic characteristics. The aerobic nature of Alloyangia pacifica strain YSBP01 suggests that it plays a role in environments where oxygen is readily available, potentially influencing biogeochemical cycles in its native habitat. Understanding the traits of this strain can assist in elucidating its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
Strainstrain YSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-keto-5-aminohexanoate cleavage proteinCEW88_RS18315Not AvailablePositive1151197 - 115213234053.7
sdr family nad(p)-dependent oxidoreductaseCEW88_RS18320Not AvailablePositive1152161 - 115306931698.1
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinCEW88_RS25240Not AvailableNegative1153227 - 115352010592.7
hypothetical proteinCEW88_RS25125Not AvailablePositive1153480 - 11536054303.11
had-iia family hydrolaseCEW88_RS18330Not AvailableNegative1153631 - 115454532407.8
phosphonate abc transporter, permease protein phneCEW88_RS18335Not AvailableNegative1154542 - 115535129351.4
phosphonate abc transporter, permease protein phneCEW88_RS18340Not AvailableNegative1155348 - 115614228258.2
phosphonate abc transporter atp-binding proteinCEW88_RS18345Not AvailableNegative1156139 - 115691528416.5
phosphate/phosphite/phosphonate abc transporter substrate-binding proteinCEW88_RS18350Not AvailableNegative1156970 - 115793534564.1
deor/glpr family dna-binding transcription regulatorCEW88_RS18355Not AvailablePositive1158095 - 115888028203.0

Displaying genes 4151 – 4160 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.