Alloyangia pacifica strain YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Alloyangia pacifica strain YSBP01 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. The presence of five replicons indicates a complex genomic structure, which may contribute to its adaptability and metabolic versatility. The strain is cataloged under several accessions, specifically NZ_CP022189.1, NZ_CP022190.1, NZ_CP022193.1, NZ_CP022194.1, and NZ_CP022192.1, highlighting its genetic information and providing avenues for further research into its genomic characteristics. The aerobic nature of Alloyangia pacifica strain YSBP01 suggests that it plays a role in environments where oxygen is readily available, potentially influencing biogeochemical cycles in its native habitat. Understanding the traits of this strain can assist in elucidating its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
Strainstrain YSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter small permeaseCEW88_RS17560Not AvailableNegative992045 - 99256319059.3
trap transporter substrate-binding protein dctpCEW88_RS17565Not AvailableNegative992573 - 99358637159.8
pqq-dependent sugar dehydrogenaseCEW88_RS17570Not AvailablePositive993772 - 99506146363.2
serine proteaseCEW88_RS17575Not AvailableNegative995168 - 99699463252.7
glycine--trna ligase subunit alphaCEW88_RS17580Not AvailablePositive997194 - 99815335886.3
duf6446 family proteinCEW88_RS17585Not AvailablePositive998150 - 99866218966.0
hydroxymethylbilane synthaseCEW88_RS17590Not AvailableNegative998720 - 99969435255.4
uroporphyrinogen decarboxylaseCEW88_RS17595Not AvailablePositive999802 - 100083937432.9
dmt family transporterCEW88_RS17600Not AvailableNegative1000847 - 100185135607.8
abc transporter atp-binding proteinCEW88_RS17605Not AvailablePositive1002087 - 100301934099.5

Displaying genes 4001 – 4010 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.