Alloyangia pacifica strain YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Alloyangia pacifica strain YSBP01 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. The presence of five replicons indicates a complex genomic structure, which may contribute to its adaptability and metabolic versatility. The strain is cataloged under several accessions, specifically NZ_CP022189.1, NZ_CP022190.1, NZ_CP022193.1, NZ_CP022194.1, and NZ_CP022192.1, highlighting its genetic information and providing avenues for further research into its genomic characteristics. The aerobic nature of Alloyangia pacifica strain YSBP01 suggests that it plays a role in environments where oxygen is readily available, potentially influencing biogeochemical cycles in its native habitat. Understanding the traits of this strain can assist in elucidating its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
Strainstrain YSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseCEW88_RS10905Not AvailablePositive2266444 - 226730130661.8
hypothetical proteinCEW88_RS10910Not AvailablePositive2267298 - 226782518699.8
glutamate--cysteine ligaseCEW88_RS10915Not AvailablePositive2267893 - 226926350262.8
atp-binding proteinCEW88_RS10920Not AvailableNegative2269850 - 227033517066.5
stas domain-containing proteinCEW88_RS10925Not AvailableNegative2270351 - 227072513151.1
thiolase family proteinCEW88_RS10930Not AvailablePositive2271007 - 227219441021.6
rlua family pseudouridine synthaseCEW88_RS10935Not AvailablePositive2272278 - 227292524238.5
n-formylglutamate amidohydrolaseCEW88_RS10940Not AvailableNegative2273001 - 227386131496.8
Trna-valNot AvailableNot AvailablePositive2274020 - 2274094Not Available
type b 50s ribosomal protein l36CEW88_RS10950Not AvailablePositive2274175 - 22743004997.26

Displaying genes 2661 – 2670 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.