Alloyangia pacifica strain YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Alloyangia pacifica strain YSBP01 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. The presence of five replicons indicates a complex genomic structure, which may contribute to its adaptability and metabolic versatility. The strain is cataloged under several accessions, specifically NZ_CP022189.1, NZ_CP022190.1, NZ_CP022193.1, NZ_CP022194.1, and NZ_CP022192.1, highlighting its genetic information and providing avenues for further research into its genomic characteristics. The aerobic nature of Alloyangia pacifica strain YSBP01 suggests that it plays a role in environments where oxygen is readily available, potentially influencing biogeochemical cycles in its native habitat. Understanding the traits of this strain can assist in elucidating its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
Strainstrain YSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseCEW88_RS07390Not AvailablePositive1548080 - 154851715537.7
translation elongation factor tsCEW88_RS07395Not AvailableNegative1549319 - 155019430438.5
30s ribosomal protein s2CEW88_RS07400Not AvailableNegative1550372 - 155114227698.4
marr family winged helix-turn-helix transcriptional regulatorCEW88_RS07410Not AvailablePositive1551556 - 155199316208.3
mfs transporterCEW88_RS07415Not AvailablePositive1551990 - 155363358044.6
hlyd family secretion proteinCEW88_RS07420Not AvailablePositive1553652 - 155468936029.5
phosphate regulon transcriptional regulator phobCEW88_RS07425Not AvailableNegative1554822 - 155551125645.8
phosphate signaling complex protein phouCEW88_RS07430Not AvailableNegative1555515 - 155625227419.9
phosphate abc transporter atp-binding protein pstbCEW88_RS07435Not AvailableNegative1556256 - 155705329476.1
phosphate abc transporter permease pstaCEW88_RS07440Not AvailableNegative1557072 - 155842448474.2

Displaying genes 1951 – 1960 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.