Francisella halioticida strain DSM 23729

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Francisellaceae

Genus

Francisella

Description

Francisella halioticida strain DSM 23729 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses flagella, which may contribute to its motility and ability to navigate its environment. It has a single replicon, indicating a streamlined genomic organization that is typical for certain bacterial species. The genomic sequence of this strain is available under the accession NZ_CP022132.1. F. halioticida is known to be associated with marine environments, particularly in relation to shellfish. Its pathogenicity is of interest in aquaculture, as it can affect abalone and other mollusks, leading to significant economic impacts. Understanding the traits and genomic features of F. halioticida can help in developing strategies for disease management in marine farming systems. In conclusion, the traits of Francisella halioticida strain DSM 23729, including its Gram-negative classification, rod-shaped structure, motility via flagella, and genomic simplicity, highlight its adaptation to marine ecosystems and its potential implications for aquaculture health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFrancisellaceae
GenusFrancisella
SpeciesFrancisella halioticida
Strainstrain DSM 23729

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Francisella halioticida strain DSM 23729
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Francisella halioticida strain DSM 23729


Gene Summary

Adenine Count

750777 bp

Thymine Count

761467 bp

Guanine Count

338347 bp

Cytosine Count

346839 bp

Genome Length

2197430 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1457564 - 1457582Not Available
Tail lysozymeCDV26_RS07850Not AvailablePositive1463390 - 146395321797.1
2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenaseCDV26_RS07855Not AvailableNegative1463950 - 146458523806.4
mfs transporterCDV26_RS07860Not AvailableNegative1464600 - 146511218855.9
malate dehydrogenaseCDV26_RS07865Not AvailablePositive1465260 - 146621934134.9
Ribonucleotide-diphosphate reductase subunit alphaCDV26_RS07870Not AvailablePositive1466414 - 146818666551.9
GlutaredoxinCDV26_RS07875Not AvailablePositive1468190 - 146845010110.0
Ribonucleotide reductase protein, small chain familyCDV26_RS07880Not AvailablePositive1468456 - 146968547254.2
eama family transporterCDV26_RS07885Not AvailableNegative1469713 - 147010214660.7
Transposase of is904hCDV26_RS07890Not AvailableNegative1470144 - 14703899449.14

Displaying genes 1 – 10 of 2461 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

50 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001210alpha,alpha'-trehalose 6,6'-bismycolateC76H142O15Chemical structure of alpha,alpha'-trehalose 6,6'-bismycolateNot available
Average1295.957Da
Monoisotopic1295.034874Da
BASm0001216alpha,alpha'-trehalose 6-mycolateC44H82O13Chemical structure of alpha,alpha'-trehalose 6-mycolateNot available
Average819.127Da
Monoisotopic818.5755427Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm00015534-hydroxy-6-methylpretetramideC20H15NO7Chemical structure of 4-hydroxy-6-methylpretetramideNot available
Average381.34Da
Monoisotopic381.0848518Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 50 metabolites

Health Effects

No health effects information available for this bacterium.