Burkholderia cepacia strain FDAARGOS_345

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain FDAARGOS_345 is a Gram-negative bacterium primarily found in the rhizosphere, where it interacts with plant roots and soil microbiota. This strain is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. The genomic structure of this strain is characterized by the presence of four replicons, suggesting a complex genetic architecture that may contribute to its adaptability and potential pathogenicity. It has been associated with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion), reflecting its ecological versatility. In humans, B. cepacia strain FDAARGOS_345 is known to be linked to serious health effects, including pneumonia, infective endocarditis, and native valve endocarditis. These conditions highlight the potential risk this bacterium poses to individuals, particularly those with compromised immune systems. The strain's ability to inhabit both the rhizosphere and various hosts underscores its ecological significance. As it interacts with plant roots, it may play a role in nutrient cycling and plant health, while its pathogenic potential in humans highlights the duality of its ecological role—beneficial in one context and harmful in another. Understanding the balance between these roles is crucial for managing both agricultural and health-related impacts of Burkholderia cepacia.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain FDAARGOS_345

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain FDAARGOS_345
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain FDAARGOS_345 chromosome 3, complete

Gene Summary

Adenine Count

198842 bp

Thymine Count

199897 bp

Guanine Count

396164 bp

Cytosine Count

393081 bp

Genome Length

1187984 bp

Protein-coding Genes

1064 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinCEQ23_RS20210Not AvailablePositive2865983 - 286641715609.6
sigma-54-dependent fis family transcriptional regulatorCEQ23_RS20215Not AvailableNegative2866443 - 286835669530.1
atp-nad kinase family proteinCEQ23_RS20220Not AvailablePositive2868893 - 286995137379.9
sdr family nad(p)-dependent oxidoreductaseCEQ23_RS20225Not AvailablePositive2870011 - 287078727264.7
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaCEQ23_RS20230Not AvailablePositive2870865 - 287184834790.4
alpha-ketoacid dehydrogenase subunit betaCEQ23_RS20235Not AvailablePositive2871903 - 287290735654.0
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunitCEQ23_RS20240Not AvailablePositive2872912 - 287402739083.7
lipoyl synthaseCEQ23_RS20245Not AvailablePositive2874030 - 287499534633.6
mate family efflux transporterCEQ23_RS20250Not AvailableNegative2875007 - 287636247757.8
arnt family glycosyltransferaseCEQ23_RS20255Not AvailableNegative2876365 - 287819768396.2

Displaying genes 6961 – 6970 of 7902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total