Burkholderia cepacia strain FDAARGOS_345

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain FDAARGOS_345 is a Gram-negative bacterium primarily found in the rhizosphere, where it interacts with plant roots and soil microbiota. This strain is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. The genomic structure of this strain is characterized by the presence of four replicons, suggesting a complex genetic architecture that may contribute to its adaptability and potential pathogenicity. It has been associated with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion), reflecting its ecological versatility. In humans, B. cepacia strain FDAARGOS_345 is known to be linked to serious health effects, including pneumonia, infective endocarditis, and native valve endocarditis. These conditions highlight the potential risk this bacterium poses to individuals, particularly those with compromised immune systems. The strain's ability to inhabit both the rhizosphere and various hosts underscores its ecological significance. As it interacts with plant roots, it may play a role in nutrient cycling and plant health, while its pathogenic potential in humans highlights the duality of its ecological role—beneficial in one context and harmful in another. Understanding the balance between these roles is crucial for managing both agricultural and health-related impacts of Burkholderia cepacia.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain FDAARGOS_345

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain FDAARGOS_345
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain FDAARGOS_345 chromosome 3, complete

Gene Summary

Adenine Count

198842 bp

Thymine Count

199897 bp

Guanine Count

396164 bp

Cytosine Count

393081 bp

Genome Length

1187984 bp

Protein-coding Genes

1064 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii histone deacetylaseCEQ23_RS19755Not AvailableNegative2767628 - 276873739519.8
mfs transporterCEQ23_RS19760Not AvailableNegative2768754 - 276996240756.5
porinCEQ23_RS19765Not AvailableNegative2769984 - 277103036610.2
helix-turn-helix transcriptional regulatorCEQ23_RS19775Not AvailablePositive2771333 - 277247842277.6
2-dehydropantoate 2-reductaseCEQ23_RS19780Not AvailablePositive2772578 - 277357633748.7
marr family winged helix-turn-helix transcriptional regulatorCEQ23_RS19785Not AvailableNegative2773757 - 277420616673.1
glycerate kinaseCEQ23_RS19790Not AvailableNegative2774269 - 277541438623.1
trigger factorCEQ23_RS19795Not AvailablePositive2775801 - 277714749786.1
atp-dependent clp endopeptidase proteolytic subunit clppCEQ23_RS19800Not AvailablePositive2777288 - 277794123765.7
atp-dependent clp protease atp-binding subunit clpxCEQ23_RS19805Not AvailablePositive2778105 - 277937646407.3

Displaying genes 6871 – 6880 of 7902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total