Escherichia coli O157 strain FDAARGOS_293

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O157 strain FDAARGOS_293 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is typically found in host-associated habitats, indicating a relationship with animal hosts. E. coli O157 is known for its mobility, attributed to the presence of flagella, which facilitate movement. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. It possesses two replicons, suggesting a complex genetic organization that may contribute to its adaptability and survival in various environments. Additionally, E. coli O157 strain FDAARGOS_293 features a double-membrane structure, a characteristic typical of Gram-negative bacteria. This strain's biotic relationship is classified as free-living, highlighting its ability to survive independently of a host under certain conditions. Given its association with animal hosts and its adaptability, E. coli O157 strain FDAARGOS_293 can play a significant role in the microbial ecology of gastrointestinal tracts and may impact both host health and environmental interactions. Overall, the traits of Escherichia coli O157 strain FDAARGOS_293 reflect its ecological versatility and potential pathogenicity, particularly in environments where it interacts with animal hosts, emphasizing the importance of monitoring such strains in food safety and public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO157 strain FDAARGOS_293

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O157 strain FDAARGOS_293
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O157 strain FDAARGOS_293


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

42 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is66 family insertion sequence element accessory protein tnpbCEP72_RS29675Not AvailablePositive8106 - 845312771.9
is66-like element isec8 family transposaseCEP72_RS29680Not AvailablePositive8503 - 1004157746.1
replication initiation proteinCEP72_RS29685Not AvailableNegative10225 - 1122938635.4
hypothetical proteinCEP72_RS29705Not AvailablePositive12909 - 1323212076.5
hypothetical proteinCEP72_RS29710Not AvailablePositive13273 - 134978158.99
hypothetical proteinCEP72_RS29715Not AvailablePositive13593 - 138178215.94
hypothetical proteinCEP72_RS29720Not AvailablePositive13868 - 1413410243.4
helix-turn-helix domain-containing proteinCEP72_RS29725Not AvailablePositive14124 - 143669289.21
hypothetical proteinCEP72_RS29735Not AvailablePositive14806 - 1508410676.6
type ii toxin-antitoxin system hica family toxinCEP72_RS29740Not AvailablePositive15521 - 157036676.34

Displaying genes 11 – 20 of 148 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.