Capnocytophaga endodontalis strain ChDC OS43

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga endodontalis strain ChDC OS43 is a bacterium characterized by the presence of flagella, which implies that it is motile. This motility can play a significant role in the organism's ability to navigate its environment, potentially influencing its interactions with other microbes and host tissues. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various conditions. The genome of Capnocytophaga endodontalis strain ChDC OS43 is cataloged under the accession number NZ_CP022022.1, providing a reference point for genomic studies and comparisons with other strains within the Capnocytophaga genus. This genus is generally associated with the oral cavity and may have implications in both dental health and systemic diseases. The presence of flagella suggests that Capnocytophaga endodontalis strain ChDC OS43 might have enhanced capabilities for colonization and biofilm formation, which are critical traits for bacteria residing in the dental environment. Understanding the motility and genomic characteristics of this strain can provide insights into its ecological role, particularly in the context of oral microbiota dynamics and its potential pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga endodontalis
Strainstrain ChDC OS43

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga endodontalis strain ChDC OS43 chromosome, complete

Gene Summary

Adenine Count

1051737 bp

Thymine Count

1055768 bp

Guanine Count

649091 bp

Cytosine Count

656090 bp

Genome Length

3412686 bp

Protein-coding Genes

3070 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive1000873 - 1002385Not Available
Trna-ileNot AvailableNot AvailablePositive1002525 - 1002598Not Available
Trna-alaNot AvailableNot AvailablePositive1002684 - 1002757Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive1002912 - 1005755Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive1005940 - 1006049Not Available
hypothetical proteinCBG49_RS04790Not AvailablePositive1006264 - 100745746600.5
gliding motility-associated c-terminal domain-containing proteinCBG49_RS04795Not AvailablePositive1007881 - 1011144118140.0
porp/sprf family type ix secretion system membrane proteinCBG49_RS04800Not AvailablePositive1011154 - 101255152601.7
septal ring lytic transglycosylase rlpa family proteinCBG49_RS04805Not AvailablePositive1012637 - 101306515608.0
yqia/ycfp family alpha/beta fold hydrolaseCBG49_RS04810Not AvailablePositive1013168 - 101366518831.7

Displaying genes 951 – 960 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.