Capnocytophaga endodontalis strain ChDC OS43

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga endodontalis strain ChDC OS43 is a bacterium characterized by the presence of flagella, which implies that it is motile. This motility can play a significant role in the organism's ability to navigate its environment, potentially influencing its interactions with other microbes and host tissues. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various conditions. The genome of Capnocytophaga endodontalis strain ChDC OS43 is cataloged under the accession number NZ_CP022022.1, providing a reference point for genomic studies and comparisons with other strains within the Capnocytophaga genus. This genus is generally associated with the oral cavity and may have implications in both dental health and systemic diseases. The presence of flagella suggests that Capnocytophaga endodontalis strain ChDC OS43 might have enhanced capabilities for colonization and biofilm formation, which are critical traits for bacteria residing in the dental environment. Understanding the motility and genomic characteristics of this strain can provide insights into its ecological role, particularly in the context of oral microbiota dynamics and its potential pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga endodontalis
Strainstrain ChDC OS43

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga endodontalis strain ChDC OS43 chromosome, complete

Gene Summary

Adenine Count

1051737 bp

Thymine Count

1055768 bp

Guanine Count

649091 bp

Cytosine Count

656090 bp

Genome Length

3412686 bp

Protein-coding Genes

3070 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolaseCBG49_RS11780Not AvailablePositive2605359 - 260620130448.6
hypothetical proteinCBG49_RS11785Not AvailablePositive2606242 - 260672118556.9
endonuclease/exonuclease/phosphatase family proteinCBG49_RS11790Not AvailablePositive2606813 - 260757429371.6
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive2607617 - 2607921Not Available
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseCBG49_RS11800Not AvailableNegative2608014 - 260893133061.8
elongation factor pCBG49_RS11805Not AvailableNegative2608934 - 260950021113.3
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseCBG49_RS11810Not AvailableNegative2609540 - 261033428913.0
bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydrataseCBG49_RS11815Not AvailableNegative2610341 - 261172951155.4
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseCBG49_RS11820Not AvailableNegative2611737 - 261275636728.2
hd domain-containing proteinCBG49_RS11825Not AvailableNegative2612917 - 261413447198.9

Displaying genes 2351 – 2360 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.