Capnocytophaga endodontalis strain ChDC OS43

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga endodontalis strain ChDC OS43 is a bacterium characterized by the presence of flagella, which implies that it is motile. This motility can play a significant role in the organism's ability to navigate its environment, potentially influencing its interactions with other microbes and host tissues. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various conditions. The genome of Capnocytophaga endodontalis strain ChDC OS43 is cataloged under the accession number NZ_CP022022.1, providing a reference point for genomic studies and comparisons with other strains within the Capnocytophaga genus. This genus is generally associated with the oral cavity and may have implications in both dental health and systemic diseases. The presence of flagella suggests that Capnocytophaga endodontalis strain ChDC OS43 might have enhanced capabilities for colonization and biofilm formation, which are critical traits for bacteria residing in the dental environment. Understanding the motility and genomic characteristics of this strain can provide insights into its ecological role, particularly in the context of oral microbiota dynamics and its potential pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga endodontalis
Strainstrain ChDC OS43

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga endodontalis strain ChDC OS43 chromosome, complete

Gene Summary

Adenine Count

1051737 bp

Thymine Count

1055768 bp

Guanine Count

649091 bp

Cytosine Count

656090 bp

Genome Length

3412686 bp

Protein-coding Genes

3070 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endo-beta-n-acetylglucosaminidase family proteinCBG49_RS05120Not AvailablePositive1079571 - 108067142505.1
duf1735 and lamg domain-containing proteinCBG49_RS05125Not AvailablePositive1080693 - 108186243049.2
t9ss type b sorting domain-containing proteinCBG49_RS05130Not AvailablePositive1082392 - 1094598439631.0
iron-sulfur cluster repair di-iron proteinCBG49_RS05135Not AvailablePositive1095206 - 109592827600.0
phosphatase pap2 family proteinCBG49_RS05140Not AvailableNegative1095985 - 109702538737.6
pddexk nuclease domain-containing proteinCBG49_RS05145Not AvailableNegative1097030 - 109819044720.0
pas domain-containing proteinCBG49_RS05150Not AvailableNegative1098199 - 109880123584.2
glycine--trna ligaseCBG49_RS05155Not AvailableNegative1098820 - 110037060012.3
comf family proteinCBG49_RS05160Not AvailablePositive1100551 - 110124026042.6
hypothetical proteinCBG49_RS05165Not AvailablePositive1101281 - 110160111485.9

Displaying genes 1021 – 1030 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.