Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate amidohydrolase | SCC1_RS04780 | Not Available | Positive | 1073915 - 1075177 | 45018.9 |
| amidohydrolase | SCC1_RS04785 | Not Available | Negative | 1075198 - 1075965 | 28831.2 |
| pyridoxal phosphate-dependent aminotransferase | SCC1_RS04790 | Not Available | Negative | 1075953 - 1077110 | 42649.9 |
| methylthioribulose 1-phosphate dehydratase | SCC1_RS04795 | Not Available | Positive | 1077291 - 1077908 | 22686.1 |
| acireductone synthase | SCC1_RS04800 | Not Available | Positive | 1077905 - 1078594 | 25776.1 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | SCC1_RS04805 | Not Available | Positive | 1078591 - 1079136 | 20720.2 |
| type vi secretion system tip protein vgrg | SCC1_RS04810 | Not Available | Positive | 1079592 - 1081619 | 74676.2 |
| duf4123 domain-containing protein | SCC1_RS04815 | Not Available | Positive | 1081621 - 1082346 | 27530.2 |
| hypothetical protein | SCC1_RS04820 | Not Available | Positive | 1082343 - 1082861 | 19224.3 |
| hypothetical protein | SCC1_RS04825 | Not Available | Positive | 1082987 - 1083505 | 19432.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

