Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SCC1_RS04525 | Not Available | Positive | 1021923 - 1022420 | 17622.3 |
| trna pseudouridine(13) synthase trud | SCC1_RS04530 | Not Available | Positive | 1022525 - 1023571 | 39054.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SCC1_RS04535 | Not Available | Positive | 1023711 - 1024337 | 23278.3 |
| murein hydrolase activator nlpd | SCC1_RS04540 | Not Available | Positive | 1024820 - 1025842 | 35127.9 |
| rna polymerase sigma factor rpos | SCC1_RS04545 | Not Available | Positive | 1025896 - 1026888 | 38102.1 |
| proline--trna ligase | SCC1_RS04550 | Not Available | Negative | 1027007 - 1028725 | 63752.5 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | SCC1_RS04555 | Not Available | Negative | 1028871 - 1029587 | 26566.0 |
| rcs stress response system protein rcsf | SCC1_RS04560 | Not Available | Negative | 1029584 - 1029994 | 14249.3 |
| metq/nlpa family lipoprotein | SCC1_RS04565 | Not Available | Negative | 1030307 - 1031122 | 29468.4 |
| methionine abc transporter permease meti | SCC1_RS04570 | Not Available | Negative | 1031188 - 1031841 | 23190.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

