Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | SCC1_RS03810 | Not Available | Negative | 858721 - 859200 | 17917.2 |
| m48 family metallopeptidase | SCC1_RS03815 | Not Available | Negative | 859320 - 859817 | 19328.4 |
| aromatic amino acid transaminase | SCC1_RS03820 | Not Available | Negative | 859986 - 861179 | 43911.4 |
| yitt family protein | SCC1_RS03825 | Not Available | Negative | 861243 - 861857 | 22324.2 |
| lrp/asnc family transcriptional regulator | SCC1_RS03830 | Not Available | Negative | 862108 - 862587 | 17609.5 |
| alpha/beta hydrolase | SCC1_RS03835 | Not Available | Positive | 863805 - 864011 | 7093.51 |
| hypothetical protein | SCC1_RS03840 | Not Available | Negative | 864080 - 864718 | 23676.2 |
| alanine racemase | SCC1_RS03845 | Not Available | Negative | 864711 - 865793 | 38956.5 |
| replicative dna helicase | SCC1_RS03850 | Not Available | Negative | 865835 - 867241 | 52677.7 |
| quinone oxidoreductase | SCC1_RS03855 | Not Available | Positive | 867489 - 868475 | 34889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

