Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SCC1_RS03045 | Not Available | Negative | 672469 - 673470 | 35463.9 |
| peptidylprolyl isomerase sura | SCC1_RS03050 | Not Available | Negative | 673486 - 674781 | 47550.7 |
| lps assembly protein lptd | SCC1_RS03055 | Not Available | Negative | 674879 - 677242 | 89610.1 |
| co-chaperone djla | SCC1_RS03060 | Not Available | Positive | 677428 - 678318 | 33596.8 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | SCC1_RS03065 | Not Available | Negative | 678401 - 679054 | 24566.6 |
| rna polymerase-associated protein rapa | SCC1_RS03070 | Not Available | Negative | 679223 - 682126 | 109839.0 |
| dna polymerase ii | SCC1_RS03075 | Not Available | Negative | 682334 - 684700 | 90637.4 |
| sensor domain-containing diguanylate cyclase | SCC1_RS03080 | Not Available | Negative | 685009 - 686589 | 59546.0 |
| deda family protein | SCC1_RS03085 | Not Available | Positive | 687019 - 687789 | 28557.1 |
| acetolactate synthase small subunit | SCC1_RS03090 | Not Available | Negative | 687825 - 688136 | 11849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

