Pectobacterium versatile strain SCC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium versatile strain SCC1 is a Gram-negative bacterium notable for its possession of flagella, which facilitates motility. This strain is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number NZ_CP021894.1, which provides a reference for researchers interested in its genomic characteristics. As a member of the Pectobacterium genus, P. versatile is associated with plant pathogenicity, particularly in soft rot diseases affecting a variety of crops. The motility conferred by its flagella may enhance its ability to navigate through plant tissues or soil, potentially increasing its virulence and capacity to infect host plants. Understanding the traits of Pectobacterium versatile strain SCC1, such as its Gram-negative classification and flagellar presence, is crucial for developing management strategies in agriculture. The streamlined genetic architecture represented by a single replicon could also inform studies on bacterial evolution and adaptation mechanisms in response to environmental pressures. Overall, the traits of P. versatile SCC1 underscore its ecological role and significance in agricultural contexts, particularly in relation to plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium versatile
Strainstrain SCC1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium versatile strain SCC1 chromosome.

Gene Summary

Adenine Count

1195122 bp

Thymine Count

1198132 bp

Guanine Count

1294470 bp

Cytosine Count

1283286 bp

Genome Length

4974798 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inosine/xanthosine triphosphataseSCC1_RS02840Not AvailableNegative629321 - 62986019664.7
2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmbSCC1_RS02845Not AvailablePositive629911 - 63056123882.8
mdr efflux pump acrab transcriptional activator robaSCC1_RS02850Not AvailableNegative630550 - 63143733981.4
protein creaSCC1_RS02855Not AvailablePositive631643 - 63212517137.7
two-component system response regulator arcaSCC1_RS02860Not AvailableNegative632180 - 63289627185.6
trna/rrna methyltransferaseSCC1_RS02865Not AvailablePositive633648 - 63433425447.7
bifunctional aspartate kinase/homoserine dehydrogenase iSCC1_RS02875Not AvailablePositive634761 - 63722088709.8
homoserine kinaseSCC1_RS02880Not AvailablePositive637223 - 63815233115.9
threonine synthaseSCC1_RS02885Not AvailablePositive638156 - 63944547269.4
peroxide stress protein yaaaSCC1_RS02890Not AvailableNegative639492 - 64026529305.1

Displaying genes 581 – 590 of 4429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.