Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SCC1_RS21570 | Not Available | Positive | 4773018 - 4773746 | 27955.0 |
| acyl-homoserine-lactone synthase cari | SCC1_RS21575 | Not Available | Negative | 4773730 - 4774380 | 25168.1 |
| argininosuccinate synthase | SCC1_RS21580 | Not Available | Negative | 4774650 - 4775996 | 50029.3 |
| dj-1/pfpi family protein | SCC1_RS21585 | Not Available | Positive | 4776409 - 4776984 | 21233.6 |
| d-xylose utilization transcriptional activator xylr | SCC1_RS21590 | Not Available | Negative | 4777042 - 4778220 | 44877.8 |
| xylose abc transporter permease xylh | SCC1_RS21595 | Not Available | Negative | 4778357 - 4779487 | 39689.9 |
| xylose abc transporter atp-binding protein | SCC1_RS21600 | Not Available | Negative | 4779516 - 4781057 | 56835.4 |
| d-xylose abc transporter substrate-binding protein | SCC1_RS21605 | Not Available | Negative | 4781174 - 4782169 | 35580.8 |
| xylose isomerase | SCC1_RS21610 | Not Available | Positive | 4782646 - 4783965 | 49500.2 |
| xylulokinase | SCC1_RS21615 | Not Available | Positive | 4784038 - 4785495 | 52777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

