Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | SCC1_RS21325 | Not Available | Positive | 4727064 - 4728341 | 47803.5 |
| pantetheine-phosphate adenylyltransferase | SCC1_RS21330 | Not Available | Positive | 4728381 - 4728863 | 17767.5 |
| glycosyltransferase family 9 protein | SCC1_RS21335 | Not Available | Negative | 4728869 - 4729843 | 37001.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | SCC1_RS21340 | Not Available | Negative | 4729910 - 4730719 | 30245.3 |
| 50s ribosomal protein l33 | SCC1_RS21345 | Not Available | Negative | 4730934 - 4731101 | 6357.91 |
| 50s ribosomal protein l28 | SCC1_RS21350 | Not Available | Negative | 4731113 - 4731349 | 8965.01 |
| radc family protein | SCC1_RS21355 | Not Available | Negative | 4731587 - 4732252 | 24828.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | SCC1_RS21360 | Not Available | Positive | 4732439 - 4733683 | 44242.4 |
| dutp diphosphatase | SCC1_RS21365 | Not Available | Positive | 4733661 - 4734119 | 16194.6 |
| nucleoid occlusion factor slma | SCC1_RS21370 | Not Available | Positive | 4734248 - 4734844 | 23141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

