Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase kdsd | SCC1_RS20570 | Not Available | Positive | 4565808 - 4566881 | 38489.5 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | SCC1_RS20575 | Not Available | Positive | 4566901 - 4567467 | 20593.9 |
| lps export abc transporter periplasmic protein lptc | SCC1_RS20580 | Not Available | Positive | 4567464 - 4568030 | 21091.9 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | SCC1_RS20585 | Not Available | Positive | 4568011 - 4568583 | 20861.7 |
| lps export abc transporter atp-binding protein | SCC1_RS20590 | Not Available | Positive | 4568587 - 4569312 | 26711.2 |
| rna polymerase factor sigma-54 | SCC1_RS20595 | Not Available | Positive | 4569362 - 4570795 | 53605.4 |
| ribosome hibernation promoting factor | SCC1_RS20600 | Not Available | Positive | 4570819 - 4571106 | 10885.1 |
| pts iia-like nitrogen regulatory protein ptsn | SCC1_RS20605 | Not Available | Positive | 4571202 - 4571675 | 17181.9 |
| rnase adapter rapz | SCC1_RS20610 | Not Available | Positive | 4571836 - 4572693 | 32556.2 |
| pts phosphocarrier protein npr | SCC1_RS20615 | Not Available | Positive | 4572725 - 4572997 | 9768.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

