Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SCC1_RS19855 | Not Available | Negative | 4415737 - 4416060 | 11788.3 |
| integrase domain-containing protein | SCC1_RS19865 | Not Available | Positive | 4417184 - 4418062 | 33146.1 |
| helix-turn-helix transcriptional regulator | SCC1_RS19870 | Not Available | Positive | 4418065 - 4418265 | 7520.25 |
| ash family protein | SCC1_RS19875 | Not Available | Positive | 4418262 - 4418798 | 19449.4 |
| alpha/beta hydrolase | SCC1_RS22840 | Not Available | Positive | 4418791 - 4419675 | 31651.8 |
| helicase repa family protein | SCC1_RS22845 | Not Available | Positive | 4419739 - 4420827 | 39288.6 |
| type ii toxin-antitoxin system rele/pare family toxin | SCC1_RS19885 | Not Available | Positive | 4421114 - 4421434 | 12162.8 |
| helix-turn-helix domain-containing protein | SCC1_RS19890 | Not Available | Positive | 4421424 - 4421708 | 10058.2 |
| hypothetical protein | SCC1_RS19895 | Not Available | Negative | 4421977 - 4422438 | 17682.2 |
| tyrosine-type recombinase/integrase | SCC1_RS19905 | Not Available | Negative | 4422974 - 4424230 | 48320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

