Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SCC1_RS19050 | Not Available | Positive | 4222602 - 4222865 | 9834.85 |
| malate dehydrogenase | SCC1_RS19055 | Not Available | Negative | 4222935 - 4223873 | 32466.4 |
| transcriptional regulator argr | SCC1_RS19060 | Not Available | Positive | 4224345 - 4224815 | 17153.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SCC1_RS19065 | Not Available | Negative | 4224901 - 4225914 | 35899.1 |
| 30s ribosomal protein s21 | SCC1_RS19070 | Not Available | Positive | 4226143 - 4226358 | 8500.42 |
| dna primase | SCC1_RS19075 | Not Available | Positive | 4226513 - 4228267 | 66416.8 |
| rna polymerase sigma factor rpod | SCC1_RS19080 | Not Available | Positive | 4228421 - 4230259 | 70162.2 |
| g/u mismatch-specific dna glycosylase | SCC1_RS19085 | Not Available | Negative | 4230356 - 4230859 | 18558.3 |
| Trna-met | Not Available | Not Available | Positive | 4231002 - 4231077 | Not Available |
| ph domain-containing protein | SCC1_RS19095 | Not Available | Positive | 4231293 - 4231850 | 20718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

