Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | SCC1_RS17980 | Not Available | Negative | 3990140 - 3991108 | 34253.5 |
| gnat family acetyltransferase | SCC1_RS17985 | Not Available | Negative | 3991445 - 3991870 | 16339.7 |
| oxygen-dependent coproporphyrinogen oxidase | SCC1_RS17990 | Not Available | Positive | 3992052 - 3992984 | 35170.3 |
| yaii/yqxd family protein | SCC1_RS17995 | Not Available | Positive | 3992988 - 3993440 | 16824.1 |
| tryptophan permease | SCC1_RS18000 | Not Available | Negative | 3993626 - 3994900 | 45931.1 |
| hypothetical protein | SCC1_RS18005 | Not Available | Positive | 3995227 - 3995961 | 27906.1 |
| hcp family type vi secretion system effector | SCC1_RS18010 | Not Available | Negative | 3996336 - 3996815 | 17810.1 |
| hypothetical protein | SCC1_RS18015 | Not Available | Negative | 3996844 - 3997053 | 7768.71 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | SCC1_RS18020 | Not Available | Negative | 3997309 - 3999588 | 82212.0 |
| sugar-binding transcriptional regulator | SCC1_RS18025 | Not Available | Negative | 3999860 - 4000822 | 35314.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

