Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobc family replication-relaxation protein | SCC1_RS17315 | Not Available | Positive | 3846502 - 3847245 | 29021.6 |
| type ii toxin-antitoxin system antitoxin ccda | SCC1_RS17320 | Not Available | Positive | 3847304 - 3847522 | 8192.59 |
| type ii toxin-antitoxin system toxin ccdb | SCC1_RS17325 | Not Available | Positive | 3847525 - 3847830 | 11603.2 |
| giy-yig nuclease family protein | SCC1_RS17330 | Not Available | Negative | 3847957 - 3849216 | 47103.2 |
| dead/deah box helicase | SCC1_RS17335 | Not Available | Negative | 3849218 - 3851227 | 74518.0 |
| class i sam-dependent dna methyltransferase | SCC1_RS17340 | Not Available | Negative | 3851220 - 3853841 | 98972.5 |
| hypothetical protein | SCC1_RS17345 | Not Available | Positive | 3853919 - 3854131 | 8396.29 |
| recombinase family protein | SCC1_RS17350 | Not Available | Positive | 3854097 - 3854666 | 21230.0 |
| dead/deah box helicase family protein | SCC1_RS17355 | Not Available | Negative | 3854783 - 3857785 | 112690.0 |
| site-specific dna-methyltransferase | SCC1_RS17360 | Not Available | Negative | 3857785 - 3859851 | 77849.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

