Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SCC1_RS17265 | Not Available | Positive | 3835832 - 3836461 | 23578.2 |
| sdr family oxidoreductase | SCC1_RS17270 | Not Available | Positive | 3836541 - 3837281 | 26331.3 |
| l-asparagine permease | SCC1_RS17275 | Not Available | Positive | 3837588 - 3839039 | 52144.7 |
| ornithine decarboxylase | SCC1_RS17280 | Not Available | Negative | 3839116 - 3841269 | 80325.9 |
| Trna-phe | Not Available | Not Available | Positive | 3841946 - 3842021 | Not Available |
| tyrosine-type recombinase/integrase | SCC1_RS17290 | Not Available | Positive | 3842183 - 3843442 | 47669.4 |
| 5'-nucleotidase | SCC1_RS17295 | Not Available | Negative | 3843657 - 3844577 | 34277.8 |
| ylci/ynfo family protein | SCC1_RS17300 | Not Available | Negative | 3844880 - 3845071 | 6924.22 |
| alpha/beta hydrolase | SCC1_RS17305 | Not Available | Positive | 3845257 - 3845599 | 12920.2 |
| hypothetical protein | SCC1_RS22590 | Not Available | Negative | 3846199 - 3846360 | 5844.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

